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American College of Medical Genetics and Genomics (ACMG) list of genes for which secondary findings should be disclosed

American College of Medical Genetics and Genomics (ACMG) list of genes for which secondary findings should be disclosed
Disease category Syndrome Gene(s)
Cancer Breast and ovarian cancer BRCA1, BRCA2, PALB2Δ
Li-Fraumeni syndrome, Peutz-Jeghers syndrome; Juvenile polyposis, and PTEN hamartoma syndrome BMPR1A*, PTEN, SMAD4*, STK11, TP53
Familial adenomatous polyposis, Lynch syndrome, and MYH-associated polyposis APC, MLH1, MSH2, MSH6, MUTYH, PMS2
Retinoblastoma, tuberous sclerosis, Von Hippel Lindau syndrome, Wilms tumor RB1, TSC1, TSC2, VHL, WT1
Multiple endocrine neoplasia 1 or 2 and familial medullary thyroid cancer MEN1, RET
Hereditary paraganglionoma-pheochromocytoma syndrome and neurofibromatosis type 2 MAXΔ, NF2, SDHAF2, SDHB, SDHC, SDHD, TMEM127Δ
Cardiovascular disease Hypertrophic or dilated cardiomyopathy ACTC1, BAG3Δ, DESΔ, FLNC, GLA, LMNA, MYBPC3, MYH7, MYL2, MYL3, PRKAG2, RBM20Δ, TNNC1Δ, TNNI3, TNNT2, TPM1, TTN
Catecholaminergic polymorphic VT, arrhythmogenic right ventricular cardiomyopathy, Long QT syndromes, and Brugada syndrome CALM1Δ, CALM2Δ, CALM3Δ, CASQ2Δ, DSC2, DSG2, DSP, KCNH2, KCNQ1, PKP2, RYR2, SCN5A, TMEM43, TRDNΔ
Familial hypercholesterolemia APOB, LDLR, PCSK9
Connective tissue or vascular integrity Ehlers-Danlos syndrome (vascular type) COL3A1
Hereditary hemorrhagic telangiectasia ACVRL1Δ, ENGΔ
Marfan syndrome, Loeys-Dietz syndrome, and familial thoracic aortic aneurysms and dissections ACTA2, FBN1, MYH11, SMAD3, TGFBR1, TGFBR2
Malignant hyperthermia sensitivity   CACNA1S, RYR1
Metabolism Wilson disease (copper metabolism) ATP7B*
Biotinidase deficiency BTDΔ
Fabry disease GLA
Pompe disease GAAΔ
Ornithine transcarbamylase deficiency (urea cycle) OTC*
Others Hereditary hemochromatosis HFEΔ
Maturity-onset diabetes of the young HNF1AΔ
Retinopathy RPE65Δ
Hereditary amyloidosis TTRΔ
This list includes genes identified by the American College of Medical Genetics and Genomics (ACMG) as clinically actionable when known pathogenic (and, in some cases, expected pathogenic) variants are identified by whole genome or exome sequencing. Refer to UpToDate topics on genetic counseling and secondary findings from genomic testing for further details. An updated list is maintained on the ClinVar website (https://www.ncbi.nlm.nih.gov/clinvar/docs/acmg/).

ACMG: American College of Medical Genetics and Genomics; VT: ventricular tachycardia.

* Added in the 2016 revision (ACMG 2.0).

MYLK was removed in the 2016 revision due to lack of an effective confirmatory test or intervention to improve outcomes.

Δ Added in the 2023 revision (ACMG 3.0 to 3.2).
Prepared with data from:
  1. Green RC, Berg JS, Grody WW, et al. ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing. Genet Med 2013; 15:565.
  2. Kalia SS, Adelman K, Bale SJ, et al. Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SF v2.0): A policy statement of the American College of Medical Genetics and Genomics. Genet Med 2017; 19:249.
  3. Miller DT, Lee K, Abul-Husn NS, et al. ACMG SF v3.2 list for reporting of secondary findings in clinical exome and genome sequencing: A policy statement of the American College of Medical Genetics and Genomics (ACMG). Genet Med 2023; 25:100866.
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