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Summary of stool tests for Clostridioides difficile

Summary of stool tests for Clostridioides difficile
Test Sensitivity and specificity Comments
Rapid tests for organism* (results available in 1 to 4 hours)
NAAT (PCR or loop-mediated isothermal amplification)

Sensitivity: 95%

Specificity: >97%
  • Expensive
  • May be used as standalone test
  • Cannot distinguish between asymptomatic carriage, active infection, or previous infection
EIA for GDH antigen

Sensitivity: 90%

Specificity: 94%
  • Inexpensive
  • Cannot distinguish toxigenic from nontoxigenic strains
  • Must be used in multistep algorithms
Rapid test for toxins* (results available in 1 to 4 hours)
EIA for toxins A and/or B

Sensitivity: 70%

Specificity: 98%
  • Inexpensive
  • Not recommended for standalone test but used in multistep algorithms
Sample multistep algorithms
EIA for GDH followed by NAAT

Sensitivity: 91 to 98%

Specificity: 96 to 98%
  • NAAT is performed only if GDH is positive
EIA for GDH followed by EIA for toxins A and B

Sensitivity: 58 to 84%

Specificity: >99%
  • Toxin EIA is performed only if GDH is positive
  • If GDH is positive and toxin EIA is negative, specimens should be further tested by NAAT
Traditional reference standards (results available in 2 to 5 days)
Toxigenic culture Reference standard for detecting toxigenic C. difficile
  • Selective anaerobic culture with toxin testing of C. difficile organisms isolated
  • Labor intensive
  • Permits molecular typing and susceptibility testing
Cell culture cytotoxicity assay Reference standard for detecting C. difficile toxins
  • Labor intensive
  • Requires trained personnel

NAAT: nucleic acid amplification test; PCR: polymerase chain reaction; EIA: enzyme immunoassay; GDH: glutamate dehydrogenase.

* Sensitivity and specificity data from Butler M, et al.

¶ Sensitivity and specificity data from Planche TD, et al.
Prepared with data from:
  1. American Society for Microbiology. A practical guidance document for the laboratory detection of toxigenic Clostridium difficile. September 21, 2010.
  2. Bagdasarian N, Rao K, Malani PN. Diagnosis and treatment of Clostridium difficile in adults: a systematic review. JAMA 2015; 313:398.
  3. Butler M, Olson A, Drekonja D, et al. Early diagnosis, prevention, and treatment of Clostridium difficile: Update. Comparative Effectiveness Review No. 172. Agency for Healthcare Research and Quality, Rockville, MD. March 2016. https://effectivehealthcare.ahrq.gov/topics/c-difficile-update/research (Accessed on February 16, 2018).
  4. Planche TD, Davies KA, Coen PG, et al. Differences in outcome according to Clostridium difficile testing method: A prospective multicentre diagnostic validation study of C. difficile infection. Lancet Infect Dis 2013; 13:936.
  5. Tamma PD, Sandora TJ. Clostridium difficile infection in children: Current state and unanswered questions. J Pediatric Infect Dis Soc 2012; 1:230.
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